CDS

Accession Number TCMCG051C18716
gbkey CDS
Protein Id XP_002307830.2
Location complement(25827725..25829689)
Gene LOC7479122
GeneID 7479122
Organism Populus trichocarpa

Protein

Length 654aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002307794.3
Definition protein LYK5 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category T
Description LysM domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0004674        [VIEW IN EMBL-EBI]
GO:0004675        [VIEW IN EMBL-EBI]
GO:0004888        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007166        [VIEW IN EMBL-EBI]
GO:0007167        [VIEW IN EMBL-EBI]
GO:0007178        [VIEW IN EMBL-EBI]
GO:0008061        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010200        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0019199        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019900        [VIEW IN EMBL-EBI]
GO:0019901        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0035690        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071323        [VIEW IN EMBL-EBI]
GO:0071417        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACTTTCTTCTACTGTATCTGTATGTGGTGCTGCTGCTCTCACCAGCACTGGTACAAGGGCAACAAACCTATGTAGCCAACCACCAACTGGACTGCTACAACAATGCCTTCAATGAAACGACCAAGGGATTTCTGTGCAACGGAGTTCAATCATCATGCCAATCCTACCTCACCTTCCGATCTATGCCTCCCTACAATTCTCCTGTCCTTATTGCCTATCTCTTAGGCGTCCCACAATCCGCCACTCGCATCGCCTCCATCAATAACCTCTCCTCTGACACTGCCACTATTCCCACCAACACCCAGGTCGTGGTTCCAGTCAACTGCTCCTGTTATGCCCGTCAATATTACCAGCACAATTCCACCTATCAGCTCAAGGACAAATCCGAAACCTACTTCAGCGTGGCCAACAACACCTACCAAGGCCTCACCACATGCCAGTCCTTGATGTCTCAGAATCCCTACGGCGATCGGAATCTGTCACTCGGTCTCACTCTCCAAATACCCCTGAGGTGTGCTTGCCCAACTTCCAACCAGAATGCTTCAGGGATCAACCACTTGCTCACCTACATGGTCACTTGGGGCGATTCCATCTCTTCCATTGCCCAGCTGTTTGGCGTTGACAAGCAGAGGGTACTTGATGCAAACAAGCTGTCTTCCTCCAATATCATTTTCCCCTTCACTCCGATTCTGGTTCCTCTGCCCACTGAGCCCACCAAAATTGAACAGCCATCGGCAGCCCCTCCGCCTGCCGCACCATCTCCGCAGACTCCCAATGTTTCCGTTGGGGGCTCTTCCGATCACAAAGCCTTGTATGTGGGTGTTGGGATAGGAGCTGCTTTCCTCATTCTTTTATTTGCTGCGTTTGGATTTCTGTTTTGGCACCGCAAATCTCGTAAGCAACAGAAGCCTGTCTCCACTTCAGAACCCGAAACGCTGCCATCAGTCTCTACTGATTTCACTGTACTCCCAGTCTCCAACAACAAATCTTGGTCTCTCTCTTCTCATGACGCCCGATATGCTATTGAGTCCTTGACTGTCTACAAATACGAGGACTTACAAGTGGCCACCGGGTACTTCGCCCAAGCTAATCTGATCAAGGGCTCGGTTTATAGGGGATCTTTCAAGGGTGACACAGCCGCAGTCAAGGTTGTGAAAGGAGATGTCTCCAGCGAGATCAACATTTTGAAGATGATCAATCACTCCAACGTCATCAGGCTCTCTGGTTTCTGCTTACATGAGGGCAACACTTACCTTGTTTATGAGTACGCCGACAATGGCTCTCTCACTGATTGGCTTCACTCTAACAACATATACCGAATTCTTGCTTGGAAGCAGAGAGTTCGGATTGCCTACGATGTGGCTGATGCCCTCAATTACCTTCACAACTACACCAACCCGTCCTATATCCATAAGAACTTGAAGACCAGCAACATTCTTTTGGATGCCAACTTGAGAGCCAAGGTTGCTAATTTCGGCTTGGCAAGAACACTGGAAAATGGCCAAGATGGTGGACTGCAACTGACAAGACATGTGGTAGGCACTCAAGGTTATTTGGCCCCCGAGTACATCGAGAATGGAGTTATCACCCCGAAATTAGATGTTTTTGCTTTCGGGGTTGTGATGTTGGAGCTCTTATCTGGGAAGGAAGCAGCTGCTACAGCTATTGACAAGATTGCAGGAGACGACTTGCTCTCTGTAATGATAATGCGTGTGCTTGAGGGGGACAATGTGAGAGAGAAACTCTCTGCCTTCCTGGACCCTTGCCTAAGAGACGAGTACCCCTTGGATCTAGCTTTCTCAATGGCCCAACTGGCTAAAAGCTGTGTCGAGCATGATCTCAATACACGACCTTCAATGCCTCAAGTTTTCATGATGTTGTCCAAGATCCTCTCGTCTTCGTTGGACTGGGATCCATCCGATGAGCTCAATCGATCTAGGTCTATAGACAGTGGCAGGTAG
Protein:  
MDFLLLYLYVVLLLSPALVQGQQTYVANHQLDCYNNAFNETTKGFLCNGVQSSCQSYLTFRSMPPYNSPVLIAYLLGVPQSATRIASINNLSSDTATIPTNTQVVVPVNCSCYARQYYQHNSTYQLKDKSETYFSVANNTYQGLTTCQSLMSQNPYGDRNLSLGLTLQIPLRCACPTSNQNASGINHLLTYMVTWGDSISSIAQLFGVDKQRVLDANKLSSSNIIFPFTPILVPLPTEPTKIEQPSAAPPPAAPSPQTPNVSVGGSSDHKALYVGVGIGAAFLILLFAAFGFLFWHRKSRKQQKPVSTSEPETLPSVSTDFTVLPVSNNKSWSLSSHDARYAIESLTVYKYEDLQVATGYFAQANLIKGSVYRGSFKGDTAAVKVVKGDVSSEINILKMINHSNVIRLSGFCLHEGNTYLVYEYADNGSLTDWLHSNNIYRILAWKQRVRIAYDVADALNYLHNYTNPSYIHKNLKTSNILLDANLRAKVANFGLARTLENGQDGGLQLTRHVVGTQGYLAPEYIENGVITPKLDVFAFGVVMLELLSGKEAAATAIDKIAGDDLLSVMIMRVLEGDNVREKLSAFLDPCLRDEYPLDLAFSMAQLAKSCVEHDLNTRPSMPQVFMMLSKILSSSLDWDPSDELNRSRSIDSGR